MRIQC: individual T1w report

Summary

  • BIDS filename: sub-3012_ses-2_T1w.
  • Date and time: 2022-12-10, 17:07.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5190475478993319
cnr2.4635921333422743
efc0.5974729641761402
fber2236.374609781478
fwhmavg4.116766666666666
fwhmx3.97118
fwhmy4.69794
fwhmz3.68118
icvscsf0.19156860348066182
icvsgm0.4023341763907707
icvswm0.4060972201285675
inumed1.9618638753890991
inurange0.8465777397155763
qi10.0
qi20.003633196292439938
rpvecsf26.52367384097906
rpvegm13.277195101156035
rpvewm15.969775702576847
sizex176
sizey256
sizez256
snrcsf2.877499710131438
snrgm9.438308575631405
snrtotal11.429248965940237
snrwm21.97193861205787
snrdcsf33.90307472112947
snrdgm73.3880938794906
snrdtotal67.56743116332365
snrdwm95.41112488935089
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk6.239243746954399
summarybgmad6.866822478733279
summarybgmean14.682971461538875
summarybgmedian14.001277729868889
summarybgn2263297.0
summarybgp054.738074973225594
summarybgp9529.759369775652885
summarybgstdv8.126525612357733
summarycsfk18.244270174554455
summarycsfmad101.1080413247969
summarycsfmean385.6978288715378
summarycsfmedian355.3556229919195
summarycsfn22824.0
summarycsfp05242.60008598864079
summarycsfp95613.5008538365364
summarycsfstdv123.49187628531891
summarygmk0.4345281821036582
summarygmmad77.50827211627677
summarygmmean775.9432215418103
summarygmmedian769.2184863835573
summarygmn15191.0
summarygmp05655.3715950325131
summarygmp95923.0994494184852
summarygmstdv81.49692940979945
summarywmk0.6911013366063705
summarywmmad42.30594078851767
summarywmmean1002.4523671834783
summarywmmedian1000.0532401353121
summarywmn249577.0
summarywmp05932.1230865865946
summarywmp951081.2393562495708
summarywmstdv45.51492948774652
tpmoverlapcsf0.18283896148204803
tpmoverlapgm0.44880905747413635
tpmoverlapwm0.5116820335388184
wm2max0.5121482533556453
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime09:26:31.350000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.012632, 0.940219, 0.340335, -0.0125808, 0.340485, -0.940166]
ImageOrientationTextSag>Tra(0.9)>Cor(0.4)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps191
PhaseResolution1
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.035403
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber8
ShimSetting[2625, 5437, -7471, 273, -68, -910, 222, -179]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp255.805
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum0d692646489e4df1bc90841ce240600c
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.